STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1097PFAM: thioesterase superfamily protein; KEGG: mno:Mnod_6840 thioesterase superfamily protein. (159 aa)    
Predicted Functional Partners:
Apre_1099
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bcb:BCB4264_A2322 enoyl-CoA hydratase/isomerase family protein.
  
  
 0.633
Apre_1098
Hypothetical protein.
       0.559
acpP
Phosphopantetheine-binding; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.558
purD
KEGG: dno:DNO_1110 phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase; phosphoribosylamine/glycine ligase; PFAM: AIR synthase related protein domain protein; phosphoribosylglycinamide synthetase; protein of unknown function DUF201; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Belongs to the GARS family.
   
   0.479
Apre_1096
PFAM: regulatory protein TetR; KEGG: sun:SUN_1158 TetR family transcriptional regulator.
     
 0.465
Apre_1095
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: radical SAM domain protein.
  
    0.451
Apre_0739
PFAM: YSIRK Gram-positive signal peptide; KEGG: hypothetical protein.
  
     0.447
Apre_1094
PFAM: GCN5-related N-acetyltransferase; KEGG: vsa:VSAL_I0612 ribosomal-protein-alanine acetyltransferase.
       0.426
Apre_0081
PFAM: acyl-CoA dehydrogenase domain protein; Rubredoxin-type Fe(Cys)4 protein; Electron transfer flavoprotein alpha subunit; Acyl-CoA dehydrogenase type 2 domain; KEGG: bcb:BCB4264_A5464 acyl-CoA dehydrogenase.
 
  
 0.403
Apre_1350
PFAM: acetyl-CoA hydrolase/transferase; KEGG: pca:Pcar_2447 putative acetyl-CoA hydrolase.
 
   
 0.401
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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