STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1119PFAM: G5 domain protein; KEGG: hypothetical protein. (1859 aa)    
Predicted Functional Partners:
Apre_1213
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: rle:RL1743 putative peptidoglycan transglycosylase penicillin-binding protein 1A.
 
 
 
 0.895
Apre_1579
PFAM: Cna B domain protein; G5 domain protein; KEGG: erythrocyte binding protein.
 
   
 0.821
Apre_1453
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: myosin heavy chain; K10352 myosin heavy chain.
 
   
 0.808
Apre_1202
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
   
 
 0.785
Apre_0744
PFAM: protein of unknown function DUF214; KEGG: bcy:Bcer98_2177 hypothetical protein.
  
  
 0.774
Apre_1094
PFAM: GCN5-related N-acetyltransferase; KEGG: vsa:VSAL_I0612 ribosomal-protein-alanine acetyltransferase.
 
     0.747
Apre_1179
KEGG: msu:MS1725 hypothetical protein.
  
     0.737
Apre_1454
PFAM: Cna B domain protein; KEGG: AGAP002737-PA.
 
   
 0.728
Apre_0742
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcb:BCB4264_A4782 sensor histidine kinase.
  
   
 0.682
Apre_0733
KEGG: viral A-type inclusion protein.
 
 
   0.629
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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