STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1138Hypothetical protein. (208 aa)    
Predicted Functional Partners:
Apre_1139
Conserved hypothetical protein; KEGG: afr:AFE_2171 GTP-binding protein.
       0.782
Apre_0091
Hypothetical protein; KEGG: bcr:BCAH187_C0151 S-layer domain ribonuclease.
  
     0.630
Apre_1033
PFAM: protein of unknown function DUF322; KEGG: bha:BH2786 hypothetical protein.
  
     0.611
Apre_0196
KEGG: rlt:Rleg2_1581 hypothetical protein.
  
     0.576
Apre_1049
KEGG: ecf:ECH74115_1558 hypothetical protein.
  
     0.558
Apre_0257
Hypothetical protein; KEGG: CG13185; K01509 adenosinetriphosphatase.
  
     0.546
Apre_1017
KEGG: hypothetical protein.
  
     0.539
Apre_1627
KEGG: pmu:PM1099 hypothetical protein.
  
     0.510
Apre_0187
PFAM: peptidase S41; KEGG: similar to Interphotoreceptor retinoid- binding protein precursor (IRBP) (Interstitial retinol-binding protein).
  
     0.504
Apre_0261
PFAM: GCN5-related N-acetyltransferase; KEGG: sbn:Sbal195_1671 GCN5-related N- acetyltransferase.
  
     0.504
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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