STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1179KEGG: msu:MS1725 hypothetical protein. (95 aa)    
Predicted Functional Partners:
Apre_1180
Hypothetical protein; KEGG: net:Neut_0709 oxidoreductase FAD/NAD(P)- binding subunit.
       0.778
Apre_1579
PFAM: Cna B domain protein; G5 domain protein; KEGG: erythrocyte binding protein.
  
     0.770
Apre_1119
PFAM: G5 domain protein; KEGG: hypothetical protein.
  
     0.737
Apre_1178
PFAM: GCN5-related N-acetyltransferase; KEGG: pmr:PMI1249 acetyltransferase.
 
     0.713
Apre_1453
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: myosin heavy chain; K10352 myosin heavy chain.
  
     0.712
Apre_1177
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
    0.693
Apre_0076
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bca:BCE_1903 GntR family transcriptional regulator.
  
  
 0.667
Apre_1454
PFAM: Cna B domain protein; KEGG: AGAP002737-PA.
  
     0.658
Apre_1181
PFAM: Uracil-DNA glycosylase superfamily; KEGG: hip:CGSHiEE_02100 hypothetical protein.
  
    0.657
Apre_0464
KEGG: erythrocyte binding protein.
 
     0.616
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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