STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1180Hypothetical protein; KEGG: net:Neut_0709 oxidoreductase FAD/NAD(P)- binding subunit. (245 aa)    
Predicted Functional Partners:
Apre_1179
KEGG: msu:MS1725 hypothetical protein.
       0.778
Apre_0226
Putative membrane protein.
  
     0.678
Apre_0524
PFAM: metallophosphoesterase.
  
     0.678
Apre_0324
Hypothetical protein; KEGG: AGAP002737-PA.
  
     0.674
Apre_1178
PFAM: GCN5-related N-acetyltransferase; KEGG: pmr:PMI1249 acetyltransferase.
       0.674
Apre_1177
Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.673
Apre_0163
KEGG: conserved hypothetical protein; K10401 kinesin family member 18/19.
  
     0.664
Apre_0408
KEGG: bca:BCE_3356 hypothetical protein.
  
     0.639
Apre_0165
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bca:BCE_5399 chain length determinant protein.
  
     0.630
Apre_1181
PFAM: Uracil-DNA glycosylase superfamily; KEGG: hip:CGSHiEE_02100 hypothetical protein.
       0.600
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.