STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1213PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: rle:RL1743 putative peptidoglycan transglycosylase penicillin-binding protein 1A. (985 aa)    
Predicted Functional Partners:
Apre_1285
Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: bcr:BCAH187_A4208 serine-type D-Ala-D-Ala carboxypeptidase DacF; Belongs to the peptidase S11 family.
 
 
 0.935
Apre_0139
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: bcy:Bcer98_1193 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.917
Apre_0495
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bsu:BSU19620 hypothetical protein.
     
 0.911
Apre_1119
PFAM: G5 domain protein; KEGG: hypothetical protein.
 
 
 
 0.895
Apre_1315
PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pca:Pcar_1046 cell division protein FtsI.
 
 
 
 0.873
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.753
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.744
Apre_1202
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
 
 0.738
Apre_0876
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; KEGG: gur:Gura_2858 peptidoglycan glycosyltransferase.
 
 
 
0.733
Apre_0760
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: wbm:Wbm0015 cell division membrane protein, FtsW; Belongs to the SEDS family.
 
 
 
 0.730
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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