STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1221KEGG: nha:Nham_2001 hypothetical protein. (441 aa)    
Predicted Functional Partners:
Apre_0275
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vvy:VV0891 ABC-type metal ion transport system, permease component.
  
 
 0.961
Apre_1220
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: bxe:Bxe_B0141 DEAD/DEAH box helicase.
 
     0.951
Apre_0276
PFAM: NLPA lipoprotein; KEGG: bcb:BCB4264_A0360 putative ABC transporter, substrate-binding protein; Belongs to the nlpA lipoprotein family.
  
 
 0.891
Apre_0277
PFAM: NLPA lipoprotein; KEGG: bpt:Bpet0722 hypothetical protein.
  
 
 0.891
Apre_1222
KEGG: hypothetical protein.
       0.812
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
    0.635
Apre_1219
Hypothetical protein.
       0.631
Apre_0705
Iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: tcx:Tcr_0904 iron dependent repressor.
   
   0.567
Apre_1218
KEGG: eta:ETA_15070 hypothetical protein.
     
 0.515
Apre_1223
PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: fructosamine kinase.
       0.497
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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