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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1315PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pca:Pcar_1046 cell division protein FtsI. (1150 aa)    
Predicted Functional Partners:
Apre_1317
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.976
Apre_1318
PFAM: cell shape determining protein MreB/Mrl; KEGG: pca:Pcar_1049 rod shape-determining protein MreB.
 
 
 0.955
Apre_0760
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: wbm:Wbm0015 cell division membrane protein, FtsW; Belongs to the SEDS family.
 
 
 0.949
Apre_1316
Hypothetical protein; KEGG: bha:BH3029 cell-shape determining protein.
 
  
 0.947
Apre_1202
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
 
 0.941
Apre_0876
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; KEGG: gur:Gura_2858 peptidoglycan glycosyltransferase.
  
  
0.934
Apre_0875
PFAM: cell cycle protein; KEGG: bcy:Bcer98_2561 stage V sporulation protein E; Belongs to the SEDS family.
 
 
 0.889
Apre_1213
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: rle:RL1743 putative peptidoglycan transglycosylase penicillin-binding protein 1A.
 
 
 
 0.873
Apre_1313
Ribonuclease G and E-like protein; KEGG: bcy:Bcer98_3160 ribonuclease.
 
    0.855
Apre_1320
PFAM: Heptaprenyl diphosphate synthase component I; KEGG: pca:Pcar_0037 hypothetical protein.
 
     0.808
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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