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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1318PFAM: cell shape determining protein MreB/Mrl; KEGG: pca:Pcar_1049 rod shape-determining protein MreB. (336 aa)    
Predicted Functional Partners:
Apre_1317
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.984
Apre_1315
PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: pca:Pcar_1046 cell division protein FtsI.
 
 
 0.955
Apre_1316
Hypothetical protein; KEGG: bha:BH3029 cell-shape determining protein.
  
  
 0.874
Apre_1314
Hypothetical protein.
  
 
 0.873
Apre_1319
TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: glo:Glov_0523 DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.830
Apre_0760
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: wbm:Wbm0015 cell division membrane protein, FtsW; Belongs to the SEDS family.
 
 
 0.817
Apre_1313
Ribonuclease G and E-like protein; KEGG: bcy:Bcer98_3160 ribonuclease.
       0.792
Apre_1320
PFAM: Heptaprenyl diphosphate synthase component I; KEGG: pca:Pcar_0037 hypothetical protein.
       0.791
Apre_1321
PFAM: protein of unknown function DUF1312; KEGG: pca:Pcar_0036 hypothetical protein.
       0.791
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.586
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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