STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1347Hypothetical protein. (250 aa)    
Predicted Functional Partners:
Apre_1017
KEGG: hypothetical protein.
  
     0.675
Apre_1016
Hypothetical protein.
  
     0.659
Apre_0897
KEGG: hypothetical protein.
  
     0.632
Apre_1333
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: hypothetical protein.
 
     0.610
Apre_1348
PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ccv:CCV52592_1631 YbaK/EbsC protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.585
Apre_0187
PFAM: peptidase S41; KEGG: similar to Interphotoreceptor retinoid- binding protein precursor (IRBP) (Interstitial retinol-binding protein).
  
     0.583
Apre_0888
Hypothetical protein; KEGG: hdu:HD1832 aminoacyl-histidine dipeptidase.
 
    0.580
Apre_0914
PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: hiq:CGSHiGG_07760 positive regulator of sigma E.
  
     0.562
Apre_1349
KEGG: hypothetical protein.
       0.553
Apre_0787
PFAM: Mannosyl-glycoprotein endo-beta-N- acetylglucosamidase; SMART: Lysozyme subfamily 2; KEGG: bcy:Bcer98_3449 N-acetylmuramoyl-L-alanine amidase.
  
     0.543
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.