STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1366PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bce:BC2371 multidrug ABC transporter permease/ATP-binding protein. (587 aa)    
Predicted Functional Partners:
potA
ABC transporter related; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
   
0.894
Apre_1365
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bca:BCE_2475 ABC transporter, ATP- binding/permease protein.
 
    
0.844
Apre_1367
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: smd:Smed_3061 transcriptional regulator, MarR family.
       0.781
Apre_1368
PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; KEGG: bar:GBAA0624 NorQ protein, putative.
       0.544
Apre_1369
KEGG: bcu:BCAH820_0678 hypothetical protein.
       0.544
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.478
Apre_1091
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcb:BCB4264_A4956 efflux ABC transporter, ATP- binding protein.
     
0.454
Apre_0743
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_2827 ABC transporter, ATPase subunit.
     
0.405
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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