Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_1387PFAM: glutaredoxin; KEGG: cps:CPS_3634 hypothetical protein. (77 aa)    
Predicted Functional Partners:
Apre_1700
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.931
Apre_1388
TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: vsa:VSAL_II0339 phosphatase.
       0.776
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.629
Apre_1386
TIGRFAM: sortase, SrtB family; PFAM: peptidase C60 sortase A and B; KEGG: bha:BH3294 hypothetical protein.
 
     0.620
Apre_1385
PFAM: 8-oxoguanine DNA glycosylase domain protein; HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: similar to N-glycosylase/DNA lyase; K03660 N- glycosylase/DNA lyase.
       0.548
Apre_0499
PFAM: YodA domain protein; KEGG: baa:BXA0197 zinc-binding lipoprotein AdcA domain protein, (pXO1-130).
  
     0.488
Apre_0739
PFAM: YSIRK Gram-positive signal peptide; KEGG: hypothetical protein.
  
    0.450
Apre_1676
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: ftn:FTN_1391 uncharacterized NAD(FAD)- dependent dehydrogenase.
  
  
 0.435
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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