STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1454PFAM: Cna B domain protein; KEGG: AGAP002737-PA. (4881 aa)    
Predicted Functional Partners:
Apre_0677
TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; KEGG: bha:BH3163 pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.807
Apre_1453
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: myosin heavy chain; K10352 myosin heavy chain.
 
     0.772
Apre_0733
KEGG: viral A-type inclusion protein.
  
     0.737
Apre_1119
PFAM: G5 domain protein; KEGG: hypothetical protein.
 
   
 0.728
Apre_1179
KEGG: msu:MS1725 hypothetical protein.
  
     0.658
Apre_1486
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bca:BCE_1804 sortase family protein.
 
   
 0.647
Apre_1485
TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: bca:BCE_5330 sortase family protein.
 
   
 0.620
Apre_0128
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU34610 hypothetical protein.
  
     0.611
Apre_0734
HIRAN; PFAM: HIRAN; KEGG: rce:RC1_1924 hypothetical protein.
  
     0.611
Apre_0129
PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU34610 hypothetical protein.
  
     0.596
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.