STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1464PFAM: protein of unknown function DUF322; KEGG: bha:BH2786 hypothetical protein. (150 aa)    
Predicted Functional Partners:
Apre_1465
Hypothetical protein.
       0.752
Apre_1466
Hypothetical protein.
       0.752
Apre_1467
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU05950 hypothetical protein.
  
  
 0.601
rex
CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.597
Apre_1469
Hypothetical protein.
       0.597
Apre_1470
TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: pca:Pcar_1211 GTP-binding protein TypA.
       0.597
Apre_1462
KEGG: hypothetical protein.
       0.474
Apre_1463
PFAM: protein of unknown function UPF0118; KEGG: bsu:BSU31800 hypothetical protein.
       0.472
Apre_0306
PFAM: major facilitator superfamily MFS_1; KEGG: cjj:CJJ81176_1679 major facilitator superfamily protein.
  
     0.418
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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