Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Apre_1493PFAM: sugar transferase; KEGG: bha:BH3716 galactosyltransferase. (200 aa)    
Predicted Functional Partners:
Apre_0164
KEGG: sbl:Sbal_2883 hypothetical protein.
  
  
 0.711
Apre_0541
TIGRFAM: capsular exopolysaccharide family; KEGG: bsu:BSU36250 hypothetical protein.
 
  
 0.693
Apre_1494
PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bha:BH3273 16S pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.
       0.655
Apre_1495
PFAM: transcriptional regulator PadR family protein; KEGG: bcr:BCAH187_A0475 transcriptional regulator, PadR family.
       0.655
Apre_0248
ATPase involved in chromosome partitioning-like protein; KEGG: rce:RC1_4006 succinoglycan biosynthesis transport protein ExoP.
 
  
 0.651
Apre_1272
PFAM: polysaccharide biosynthesis protein CapD; 3- beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: gme:Gmet_1338 polysaccharide biosynthesis protein CapD.
 
  
 0.632
Apre_0540
PFAM: lipopolysaccharide biosynthesis protein; KEGG: bce:BC5278 chain length regulator (capsular polysaccharide biosynthesis).
 
  
 0.591
Apre_1271
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bce:BC5273 UDP-bacillosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.566
Apre_1497
PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family protein.
       0.555
Apre_1496
UvrD/REP helicase; ATP-dependent DNA helicase.
       0.548
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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