STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1497PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family protein. (168 aa)    
Predicted Functional Partners:
Apre_1496
UvrD/REP helicase; ATP-dependent DNA helicase.
  
    0.795
Apre_1495
PFAM: transcriptional regulator PadR family protein; KEGG: bcr:BCAH187_A0475 transcriptional regulator, PadR family.
       0.662
Apre_1494
PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bha:BH3273 16S pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.
  
    0.649
Apre_1493
PFAM: sugar transferase; KEGG: bha:BH3716 galactosyltransferase.
       0.557
Apre_1498
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dal:Dalk_2354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
    0.543
Apre_0183
PFAM: peptidase M22 glycoprotease; KEGG: bha:BH0546 glycoprotein endopeptidase.
  
 
 0.457
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.438
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
  
 0.400
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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