STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1498PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dal:Dalk_2354 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (393 aa)    
Predicted Functional Partners:
Apre_0504
PFAM: beta-lactamase domain protein; KEGG: cha:CHAB381_0232 flavodoxin.
 
  
 0.921
Apre_0082
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cha:CHAB381_0232 flavodoxin.
 
  
 0.854
Apre_0081
PFAM: acyl-CoA dehydrogenase domain protein; Rubredoxin-type Fe(Cys)4 protein; Electron transfer flavoprotein alpha subunit; Acyl-CoA dehydrogenase type 2 domain; KEGG: bcb:BCB4264_A5464 acyl-CoA dehydrogenase.
  
 
 0.838
Apre_1472
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: ppd:Ppro_0466 rubredoxin-type Fe(Cys)4 protein.
  
 
 0.767
Apre_1473
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dvl:Dvul_0203 rubredoxin-type Fe(Cys)4 protein.
  
 
 0.767
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.727
Apre_1496
UvrD/REP helicase; ATP-dependent DNA helicase.
  
    0.567
Apre_1497
PFAM: GCN5-related N-acetyltransferase; KEGG: acetyltransferase, GNAT family protein.
  
    0.543
Apre_1060
PFAM: iron-containing alcohol dehydrogenase; KEGG: alcohol dehydrogensae.
 
  
 0.486
Apre_1495
PFAM: transcriptional regulator PadR family protein; KEGG: bcr:BCAH187_A0475 transcriptional regulator, PadR family.
       0.461
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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