STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1523PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcz:BCZK2768 ABC transporter, ATP-binding protein. (220 aa)    
Predicted Functional Partners:
Apre_1520
Signal transduction histidine kinase-like protein; KEGG: bcz:BCZK2894 sensor histidine kinase.
 
  
 0.924
Apre_1519
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bcz:BCZK2895 response regulator of salavaricin regulon.
 
  
 0.836
Apre_1521
Hypothetical protein; KEGG: vei:Veis_2454 major facilitator superfamily MFS_1.
       0.794
Apre_1522
KEGG: Hypothetical protein CBG09235.
       0.794
Apre_1411
PFAM: sugar-binding domain protein; Rib/alpha/Esp surface antigen repeat protein; KEGG: Hypothetical protein CBG09238.
  
     0.544
Apre_0773
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_3436 putative ABC transporter, ATP- binding protein.
 
  
 0.540
Apre_1091
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcb:BCB4264_A4956 efflux ABC transporter, ATP- binding protein.
  
 0.533
Apre_0640
Conserved hypothetical protein; KEGG: bcz:BCZK0910 ABC transporter permease.
 
  
 0.531
Apre_0113
Hypothetical protein; KEGG: mgm:Mmc1_1169 poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit.
  
     0.513
Apre_0588
TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: dac:Daci_4253 hypothetical protein.
  
     0.499
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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