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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1579PFAM: Cna B domain protein; G5 domain protein; KEGG: erythrocyte binding protein. (4909 aa)    
Predicted Functional Partners:
Apre_0677
TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; PEP-utilising protein mobile region; Pyruvate kinase alpha/beta; KEGG: bha:BH3163 pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.827
Apre_1119
PFAM: G5 domain protein; KEGG: hypothetical protein.
 
   
 0.821
Apre_0464
KEGG: erythrocyte binding protein.
 
   
 0.799
Apre_1179
KEGG: msu:MS1725 hypothetical protein.
  
     0.770
Apre_1453
TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: myosin heavy chain; K10352 myosin heavy chain.
  
   
 0.766
Apre_0744
PFAM: protein of unknown function DUF214; KEGG: bcy:Bcer98_2177 hypothetical protein.
  
    0.760
Apre_1123
KEGG: nis:NIS_0123 hypothetical protein.
  
     0.716
Apre_0640
Conserved hypothetical protein; KEGG: bcz:BCZK0910 ABC transporter permease.
  
     0.696
Apre_0549
Putative membrane protein; KEGG: bcr:BCAH187_A1238 phage infection protein.
  
   
 0.661
Apre_0742
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bcb:BCB4264_A4782 sensor histidine kinase.
  
   
 0.645
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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