STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1602PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: asu:Asuc_0371 mannitol dehydrogenase domain-containing protein. (526 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.996
uxaC
PFAM: Glucuronate isomerase; KEGG: bsu:BSU12300 glucuronate isomerase.
 
 
 0.988
Apre_1587
PTS modulated transcriptional regulator, MtlR family; PFAM: PRD domain protein; Helix-turn-helix type 11 domain protein; M trans-acting positive regulator; KEGG: bsu:BSU38600 transcriptional regulator.
  
  
 0.771
Apre_0383
TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: bcy:Bcer98_2394 PTS system, fructose subfamily, IIC subunit.
  
  
 0.699
Apre_1615
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: asu:Asuc_0372 GntR family transcriptional regulator.
 
   
 0.644
Apre_1599
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: bcz:pE33L466_0341 keto-hydroxyglutarate- aldolase/keto-deoxy-phosphogluconate aldolase.
  
  
 0.619
Apre_1593
TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: hsm:HSM_0410 sugar (glycoside-pentoside- hexuronide) transporter.
 
   
 0.579
Apre_1592
TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: hsm:HSM_0410 sugar (glycoside-pentoside- hexuronide) transporter.
 
   
 0.562
Apre_1598
PFAM: PfkB domain protein; KEGG: sus:Acid_2122 ribokinase-like domain-containing protein.
     
 0.534
Apre_1603
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: bcr:BCAH187_A0470 glycosyl hydrolase family protein.
  
  
 0.453
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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