STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1605KEGG: gsu:GSU3295 hypothetical protein. (424 aa)    
Predicted Functional Partners:
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
     
 0.913
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
     
 0.913
Apre_0912
PFAM: beta-lactamase domain protein; KEGG: bcb:BCB4264_A4375 metallo-beta-lactamase family protein.
     
  0.900
Apre_1705
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: sat:SYN_00474 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit.
 
  
 0.892
Apre_1704
PFAM: PP-loop domain protein; KEGG: sfu:Sfum_1060 PP-loop domain protein.
 
  
 0.875
Apre_1706
KEGG: aba:Acid345_2031 protein of unknown function DUF111.
 
  
 0.703
Apre_1707
KEGG: sat:SYN_00476 hypothetical protein.
 
  
 0.563
Apre_1606
PFAM: Chromate transporter; KEGG: gur:Gura_1288 chromate transporter.
       0.533
Apre_1607
PFAM: Chromate transporter; KEGG: gur:Gura_1287 chromate transporter.
       0.533
Apre_1357
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; KEGG: bcz:BCZK1190 (S)-2-hydroxy-acid oxidase, subunit D.
 
   
 0.526
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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