Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_1608PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: sus:Acid_4901 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 2 family. (1093 aa)    
Predicted Functional Partners:
Apre_0237
PFAM: glycoside hydrolase clan GH-D; KEGG: bha:BH2223 alpha-galactosidase.
 
 
 0.936
Apre_0072
PFAM: glycoside hydrolase clan GH-D; KEGG: bha:BH2223 alpha-galactosidase.
 
 
 0.935
Apre_1609
TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: pat:Patl_0120 putative alpha-1,2-mannosidase.
 
   
 0.930
Apre_0894
PFAM: ROK family protein; KEGG: bha:BH1425 glucose kinase.
    
 0.910
Apre_1610
Hypothetical protein.
 
  
 0.873
Apre_0150
PFAM: conserved hypothetical protein; KEGG: bha:BH0790 hypothetical protein.
 
   
 0.707
Apre_0148
PFAM: Hyaluronidase; KEGG: xcv:XCV4043 putative secreted protein.
 
 0.628
Apre_1606
PFAM: Chromate transporter; KEGG: gur:Gura_1288 chromate transporter.
       0.618
Apre_1607
PFAM: Chromate transporter; KEGG: gur:Gura_1287 chromate transporter.
       0.618
Apre_0149
PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: bha:BH0789 hypothetical protein.
 
   
 0.585
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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