Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_1615Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: asu:Asuc_0372 GntR family transcriptional regulator. (230 aa)    
Predicted Functional Partners:
Apre_1435
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcy:Bcer98_1411 GntR family transcriptional regulator.
  
     0.773
Apre_1602
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: asu:Asuc_0371 mannitol dehydrogenase domain-containing protein.
 
   
 0.642
Apre_1612
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: asu:Asuc_0367 tripartite ATP-independent periplasmic transporter DctQ.
 
     0.610
Apre_1614
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bsu:BSU12330 hypothetical protein.
     
 0.604
Apre_1613
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: asu:Asuc_0366 TRAP dicarboxylate transporter, DctP subunit.
 
     0.590
Apre_1611
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: asu:Asuc_0368 TRAP dicarboxylate transporter, DctM subunit.
  
    0.536
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.521
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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