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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1625PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: cak:Caul_0319 ATPase BadF/BadG/BcrA/BcrD type. (301 aa)    
Predicted Functional Partners:
murQ
Glucokinase regulatory-like protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.810
Apre_0077
KEGG: bcr:BCAH187_A2109 N-acetylglucosamine-6- phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase.
 
  
 0.703
Apre_1624
PFAM: aminotransferase class I and II; KEGG: cco:CCC13826_0327 aminotransferase, class II.
       0.535
Apre_1626
PFAM: dihydrofolate reductase region; KEGG: fta:FTA_0239 dihydrofolate reductase type I.
       0.511
Apre_1627
KEGG: pmu:PM1099 hypothetical protein.
       0.511
Apre_1544
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pmr:PMI2814 RpiR-family transcriptional regulator.
 
     0.486
Apre_0456
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: bsu:BSU08190 hypothetical protein.
 
     0.471
Apre_1591
PFAM: glycoside hydrolase family 3 domain protein; KEGG: mmw:Mmwyl1_3059 xylan 1,4-beta-xylosidase.
 
    0.445
Apre_1543
PFAM: beta-lactamase; KEGG: eum:ECUMN_2751 D-lactyl ether N-acetylmuramic- 6-phosphate acid etherase; beta-lactamase family.
 
    0.420
Apre_0309
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: Os08g0557900; hypothetical protein.
  
     0.411
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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