Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Apre_1657PFAM: Rubrerythrin; KEGG: sat:SYN_02523 rubrerythrin. (196 aa)    
Predicted Functional Partners:
Apre_1143
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: bcr:BCAH187_A0593 transcriptional regulator, Fur family; Belongs to the Fur family.
 
  
 0.569
Apre_0048
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
  
 0.541
Apre_1656
TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: bsu:BSU35020 N-acetylglucosamine-6-phosphate isomerase.
       0.516
Apre_0504
PFAM: beta-lactamase domain protein; KEGG: cha:CHAB381_0232 flavodoxin.
 
  
 0.509
Apre_0082
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: cha:CHAB381_0232 flavodoxin.
 
  
 0.483
Apre_1085
TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; iron hydrogenase small subunit; 4Fe-4S ferredoxin iron- sulfur binding domain protein; ferredoxin; KEGG: pca:Pcar_1633 NAD-reducing iron-only hydrogenase large subunit.
    
 0.470
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: bha:BH3343 glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.418
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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