STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1677PFAM: NADPH-dependent FMN reductase; KEGG: rme:Rmet_2021 NADPH-dependent FMN reductase. (180 aa)    
Predicted Functional Partners:
Apre_1678
PFAM: Pirin domain protein; KEGG: lip:LI0289 pirin-related protein; Belongs to the pirin family.
  
  
 0.799
Apre_1679
PFAM: regulatory protein MarR; transcriptional regulator TrmB; Penicillinase repressor; SMART: regulatory protein MarR; KEGG: abu:Abu_0136 MarR family transcriptional regulator.
     
 0.787
Apre_0683
KEGG: hso:HS_0428 hypothetical protein.
  
 
 0.492
Apre_0526
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: bra:BRADO4365 putative alkanesulfonate ABC transporter, substrate binding protein.
  
  
 0.486
Apre_0793
KEGG: hypothetical protein.
  
  
 0.486
Apre_1680
Hypothetical protein.
       0.465
Apre_1681
TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: acp:A2cp1_0265 oligopeptide transporter, OPT family.
       0.465
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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