STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1683PFAM: Na+/H+ antiporter NhaC; Citrate transporter; KEGG: shw:Sputw3181_1499 Na+/H+ antiporter NhaC. (528 aa)    
Predicted Functional Partners:
Apre_1682
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: dal:Dalk_3618 protein of unknown function DUF21.
       0.551
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.470
atpB-2
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
       0.470
atpA-2
H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.470
atpF
Vacuolar H+transporting two-sector ATPase F subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.464
Apre_1688
PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: pleckstrin homology (PH) domain containing protein with N-terminal ankyrin repeats.
       0.464
atpE
H+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.464
Apre_1680
Hypothetical protein.
 
     0.455
Apre_1690
PFAM: H+transporting two-sector ATPase C subunit; KEGG: Atp6v0c; ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c; K02155 V-type H+-transporting ATPase 16kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.
       0.452
Apre_1691
Sodium-transporting two-sector ATPase; PFAM: V-type ATPase 116 kDa subunit; KEGG: afw:Anae109_2569 V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
       0.448
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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