STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Apre_1722KEGG: dds:Ddes_1465 nitrogen regulatory protein P- II (GlnB, GlnK). (105 aa)    
Predicted Functional Partners:
Apre_1723
PFAM: protein of unknown function DUF1538; KEGG: sfr:Sfri_2271 protein of unknown function DUF1538.
 
     0.913
Apre_1721
PFAM: Thioredoxin domain; KEGG: bha:BH3098 thioredoxin; Belongs to the thioredoxin family.
  
    0.795
Apre_1720
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: afw:Anae109_2361 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.781
Apre_1719
PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_1654 GCN5-related N- acetyltransferase.
  
    0.714
Apre_0526
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein; KEGG: bra:BRADO4365 putative alkanesulfonate ABC transporter, substrate binding protein.
   
 
 0.681
Apre_0793
KEGG: hypothetical protein.
   
 
 0.681
Apre_0528
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bca:BCE_2961 sulfonate ABC transporter, ATP- binding protein, putative.
    
 
 0.665
Apre_0507
TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pca:Pcar_2216 NAD synthetase.
  
  
 0.578
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
  
  
 0.575
Apre_0527
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2515 putative alkanesulfonate ABC transporter, permease protein.
    
 
 0.571
Your Current Organism:
Anaerococcus prevotii DSM 20548
NCBI taxonomy Id: 525919
Other names: A. prevotii DSM 20548, Anaerococcus prevotii ATCC 9321, Anaerococcus prevotii CCUG 41932, Anaerococcus prevotii str. DSM 20548, Anaerococcus prevotii strain DSM 20548
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