STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ29834.1Na+/melibiose symporter. (440 aa)    
Predicted Functional Partners:
SIQ29767.1
Hypothetical protein.
 
  
 0.949
SIQ29730.1
Hypothetical protein.
 
   
 0.893
SIQ29798.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
     0.865
SIQ29698.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
  
    0.817
SIQ29670.1
Putative phosphoesterase.
       0.773
SIQ29873.1
Protein phosphatase.
       0.773
SIQ29635.1
ATP-dependent helicase Lhr and Lhr-like helicase.
       0.678
SIQ29907.1
Uncharacterized conserved protein GlcG, DUF336 family.
       0.584
SIQ29605.1
Methyltransferase domain-containing protein.
       0.530
SIR26976.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.518
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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