STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ30795.1Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. (416 aa)    
Predicted Functional Partners:
SIQ83778.1
Thioesterase domain-containing protein.
    
 0.832
SIQ30762.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 0.799
SIQ08547.1
Indolepyruvate ferredoxin oxidoreductase.
    
 0.662
SIQ88396.1
Acyl transferase domain-containing protein.
   
 0.655
SIQ08432.1
Acetolactate synthase, large subunit.
  
 
 0.653
SIR01352.1
Acetolactate synthase-1/2/3 large subunit.
  
 
 0.653
SIQ79409.1
Short chain enoyl-CoA hydratase.
    
 0.622
SIR20175.1
3-hydroxyacyl-CoA dehydrogenase.
    
 0.622
SIR23041.1
Phosphate acetyltransferase/phosphate butyryltransferase.
    
 0.613
SIR00549.1
3-methylfumaryl-CoA hydratase.
  
 
 0.550
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.