STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ27671.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (78 aa)    
Predicted Functional Partners:
SIQ32136.1
PIN domain nuclease, a component of toxin-antitoxin system (PIN domain).
 
    0.610
SIQ27704.1
Putative acetyltransferase.
       0.601
SIQ27735.1
Putative acetyltransferase.
       0.601
vapC
Predicted nucleic-acid-binding protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.583
SIQ27633.1
Hypothetical protein.
  
    0.559
SIR57109.1
Hypothetical protein.
 
 
   0.524
SIR58083.1
Hypothetical protein.
 
     0.523
SIR56274.1
Protein of unknown function.
  
     0.492
SIR15180.1
Acetyltransferase (GNAT) family protein.
  
     0.489
SIR13350.1
Predicted nucleic-acid-binding protein, contains PIN domain.
  
     0.483
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.