STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ45644.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. (94 aa)    
Predicted Functional Partners:
SIQ45602.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 0.999
SIQ45686.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 0.999
SIQ45760.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.998
SIQ45723.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.996
SIR15908.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.987
SIR13260.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.955
SIQ45527.1
phenylacetate-CoA ligase.
 
 
 0.946
SIQ84060.1
Ferredoxin-NADP reductase.
 
 
 0.929
SIQ07902.1
Metal-sulfur cluster biosynthetic enzyme.
  
 
 0.768
SIR03662.1
FeS assembly SUF system protein.
  
 
 0.768
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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