STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ64770.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
SIR35288.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
  
 
 0.647
SIQ64839.1
Uncharacterized oxidoreductase; Belongs to the LDH2/MDH2 oxidoreductase family.
    
  0.596
SIQ98602.1
Alcohol dehydrogenase (cytochrome c).
  
 
 0.595
SIR01011.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
  
 
 0.579
SIQ03285.1
Alcohol dehydrogenase (cytochrome c).
  
 
 0.575
SIQ78138.1
Gluconolactonase.
    
 0.560
SIQ85610.1
Gluconolactonase.
    
 0.560
SIR12288.1
Gluconolactonase.
    
 0.560
SIQ64803.1
NIPSNAP protein.
       0.558
SIQ51323.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
    
  0.526
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.