STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ63791.1Kynurenine formamidase. (322 aa)    
Predicted Functional Partners:
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.960
SIQ63832.1
Long-chain acyl-CoA synthetase.
 
  
  0.841
SIQ30520.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.838
SIQ62096.1
Urea carboxylase precursor.
    
  0.726
SIQ06881.1
2-octaprenyl-6-methoxyphenol hydroxylase.
    
 0.666
SIQ82053.1
Hypothetical protein.
  
    0.582
SIQ87824.1
Cupin domain-containing protein.
  
    0.582
SIR57049.1
Uncharacterized conserved protein, cupin superfamily.
  
    0.582
SIQ88029.1
Transcriptional regulator, TetR family.
  
     0.516
SIQ08547.1
Indolepyruvate ferredoxin oxidoreductase.
    
  0.512
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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