STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ82873.1Hypothetical protein. (357 aa)    
Predicted Functional Partners:
SIQ05711.1
Glycosyltransferase, GT2 family.
     0.935
SIQ09588.1
Glycosyl transferase family 2.
     0.930
SIQ14988.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.772
SIQ50355.1
Glycosyltransferase, GT2 family.
     0.666
SIQ61711.1
Glycosyltransferase, GT2 family.
     0.583
SIQ82796.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
       0.534
queE
7-carboxy-7-deazaguanine synthase, Cx14CxxC type; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
       0.534
SIQ39551.1
Glycosyltransferase, GT2 family.
     0.446
SIQ82768.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.418
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.