Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIQ05875.1 | SIQ87901.1 | SAMN05421828_101114 | SAMN05421828_1113 | Conserved hypothetical protein, steroid delta-isomerase-related. | Predicted amidohydrolase. | 0.799 |
SIQ05875.1 | SIQ87940.1 | SAMN05421828_101114 | SAMN05421828_1114 | Conserved hypothetical protein, steroid delta-isomerase-related. | Hypothetical protein. | 0.815 |
SIQ62488.1 | SIQ87940.1 | SAMN05421828_10735 | SAMN05421828_1114 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.713 |
SIQ87901.1 | SIQ05875.1 | SAMN05421828_1113 | SAMN05421828_101114 | Predicted amidohydrolase. | Conserved hypothetical protein, steroid delta-isomerase-related. | 0.799 |
SIQ87901.1 | SIQ87940.1 | SAMN05421828_1113 | SAMN05421828_1114 | Predicted amidohydrolase. | Hypothetical protein. | 0.955 |
SIQ87901.1 | SIQ87978.1 | SAMN05421828_1113 | SAMN05421828_1115 | Predicted amidohydrolase. | Cytochrome C oxidase, cbb3-type, subunit III. | 0.807 |
SIQ87901.1 | lpxB | SAMN05421828_1113 | SAMN05421828_1112 | Predicted amidohydrolase. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.814 |
SIQ87940.1 | SIQ05875.1 | SAMN05421828_1114 | SAMN05421828_101114 | Hypothetical protein. | Conserved hypothetical protein, steroid delta-isomerase-related. | 0.815 |
SIQ87940.1 | SIQ62488.1 | SAMN05421828_1114 | SAMN05421828_10735 | Hypothetical protein. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.713 |
SIQ87940.1 | SIQ87901.1 | SAMN05421828_1114 | SAMN05421828_1113 | Hypothetical protein. | Predicted amidohydrolase. | 0.955 |
SIQ87940.1 | SIQ87978.1 | SAMN05421828_1114 | SAMN05421828_1115 | Hypothetical protein. | Cytochrome C oxidase, cbb3-type, subunit III. | 0.773 |
SIQ87940.1 | SIR30268.1 | SAMN05421828_1114 | SAMN05421828_12359 | Hypothetical protein. | RloB-like protein. | 0.672 |
SIQ87940.1 | SIR46218.1 | SAMN05421828_1114 | SAMN05421828_1354 | Hypothetical protein. | Phosphomannomutase. | 0.613 |
SIQ87940.1 | glmM | SAMN05421828_1114 | SAMN05421828_1188 | Hypothetical protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.613 |
SIQ87940.1 | glmS | SAMN05421828_1114 | SAMN05421828_11416 | Hypothetical protein. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.726 |
SIQ87940.1 | glpK | SAMN05421828_1114 | SAMN05421828_10662 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.638 |
SIQ87940.1 | lpxB | SAMN05421828_1114 | SAMN05421828_1112 | Hypothetical protein. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.810 |
SIQ87978.1 | SIQ87901.1 | SAMN05421828_1115 | SAMN05421828_1113 | Cytochrome C oxidase, cbb3-type, subunit III. | Predicted amidohydrolase. | 0.807 |
SIQ87978.1 | SIQ87940.1 | SAMN05421828_1115 | SAMN05421828_1114 | Cytochrome C oxidase, cbb3-type, subunit III. | Hypothetical protein. | 0.773 |
SIQ87978.1 | lpxB | SAMN05421828_1115 | SAMN05421828_1112 | Cytochrome C oxidase, cbb3-type, subunit III. | lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.768 |
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