STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ93502.1D-xylose transport system ATP-binding protein. (246 aa)    
Predicted Functional Partners:
SIQ38148.1
Ribose transport system permease protein/AI-2 transport system permease protein/rhamnose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.975
SIQ93564.1
Ribose transport system substrate-binding protein.
 
  0.971
SIQ93534.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.968
SIQ77986.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.871
SIR43223.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.863
SIR09882.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.862
SIQ93468.1
Transcriptional regulator, LacI family.
 
 
  0.860
SIR36281.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.849
SIQ42690.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.848
SIQ38179.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.845
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.