STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ95365.1Hypothetical protein. (630 aa)    
Predicted Functional Partners:
SIQ95398.1
Hypothetical protein.
       0.752
SIQ95425.1
Hypothetical protein.
       0.752
SIQ95459.1
Hypothetical protein.
       0.707
SIQ95489.1
Hypothetical protein.
       0.707
SIQ95521.1
Hypothetical protein.
       0.707
SIQ95328.1
Pectate lyase superfamily protein.
      
0.628
SIQ95296.1
Hypothetical protein.
       0.615
SIQ95261.1
Hypothetical protein.
       0.584
SIQ95228.1
Hypothetical protein.
       0.474
SIQ95194.1
Uncharacterized phage protein gp47/JayE.
       0.400
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.