STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR10214.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (333 aa)    
Predicted Functional Partners:
SIQ88396.1
Acyl transferase domain-containing protein.
   
 0.928
SIQ83778.1
Thioesterase domain-containing protein.
  
 
 0.927
SIQ96239.1
Thioesterase domain-containing protein.
  
 0.895
SIR11766.1
Glutamate synthase (NADPH) large subunit.
    
  0.839
SIQ62096.1
Urea carboxylase precursor.
     
 0.636
SIQ94076.1
Predicted naringenin-chalcone synthase.
  
 
 0.619
SIQ73321.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.614
SIQ61826.1
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase.
    
 0.613
SIR10241.1
NADPH-glutathione reductase.
  
 
  0.571
SIQ36674.1
Cytochrome P450.
   
 0.566
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.