STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR10291.1Nicotinate phosphoribosyltransferase. (387 aa)    
Predicted Functional Partners:
SIR05879.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
   
 0.918
SIR41133.1
NAD+ diphosphatase.
    
 0.876
SIR12313.1
Nicotinamidase/pyrazinamidase.
  
 
 0.867
SIQ51213.1
ATP diphosphatase.
     
 0.863
SIR47814.1
Sulfur-oxidizing protein SoxB; Belongs to the 5'-nucleotidase family.
    
 0.848
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.843
SIR10266.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
       0.818
SIQ53607.1
Rod shape-determining protein MreD.
  
     0.754
SIQ49835.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.746
SIQ83072.1
Periplasmic chaperone for outer membrane proteins Skp.
  
     0.742
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.