STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR18198.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (506 aa)    
Predicted Functional Partners:
SIQ50102.1
Dolichol-phosphate mannosyltransferase.
 
  0.912
SIQ72257.1
Undecaprenyl-diphosphatase.
 
  
 0.686
SIQ89160.1
Chitin deacetylase.
  
 
 0.614
SIR22408.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
  
 
 0.614
SIR18251.1
Hypothetical protein.
 
     0.569
SIR20305.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
    
  0.542
SIQ53325.1
KDO2-lipid IV(A) lauroyltransferase.
 
  
 0.531
SIQ96239.1
Thioesterase domain-containing protein.
     
 0.521
SIR18225.1
Protein SCO1/2.
       0.506
SIR18275.1
Cytochrome c553.
       0.506
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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