STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR22331.1Exosortase A. (508 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.999
SIQ94076.1
Predicted naringenin-chalcone synthase.
    
  0.983
SIR22380.1
FemAB-related protein, PEP-CTERM system-associated.
 
     0.954
SIR22408.1
Polysaccharide deacetylase family protein, PEP-CTERM locus subfamily.
 
     0.954
SIR22434.1
Type II secretory pathway, component ExeA (predicted ATPase).
 
    0.953
SIR22354.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.950
SIR22491.1
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein.
 
    0.894
SIR22519.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
 
     0.893
SIR22546.1
Polysaccharide export outer membrane protein.
 
     0.880
SIR22647.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
 
     0.805
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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