STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR22594.1Putative PEP-CTERM system histidine kinase. (669 aa)    
Predicted Functional Partners:
SIQ36553.1
Signal transduction histidine kinase.
  
 0.995
SIR39408.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.986
SIR48393.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.981
SIR57626.1
Transcriptional regulator, LuxR family.
   
 0.979
SIR22647.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
 
 
  0.966
SIR22622.1
Two-component system, NtrC family, response regulator.
 
 
  0.948
SIQ14859.1
PAS domain S-box-containing protein.
   
 0.937
SIQ37194.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.928
SIR22714.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.927
SIR22672.1
Probable O-glycosylation ligase, exosortase A-associated.
 
     0.926
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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