STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR29563.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
SIR28905.1
Intracellular multiplication protein IcmP.
   
 
 0.956
SIR28825.1
TraM recognition site of TraD and TraG.
   
 
 0.956
SIR29588.1
Hypothetical protein.
       0.746
SIR29539.1
Intracellular multiplication protein IcmB.
       0.637
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
    
  0.633
SIR29452.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
       0.580
SIR29487.1
Hypothetical protein.
       0.580
SIR29513.1
Hypothetical protein.
       0.580
SIR29426.1
Hypothetical protein.
       0.561
SIR29687.1
Intracellular multiplication protein IcmK.
     
 0.529
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.