STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR31121.1MoxR-like ATPase. (342 aa)    
Predicted Functional Partners:
SIR31149.1
Protein of unknown function DUF58.
  
 0.982
SIR31196.1
Hypothetical protein.
 
     0.938
SIR31175.1
N-terminal double-transmembrane domain-containing protein.
 
     0.931
SIR20432.1
Arginine decarboxylase.
    
 
 0.878
SIR23189.1
Ornithine decarboxylase.
    
 
 0.878
SIQ16963.1
Protoporphyrin IX magnesium-chelatase.
  
 
 0.715
SIR31092.1
Hypothetical protein.
 
     0.694
SIQ27009.1
Protein of unknown function.
  
 
   0.609
SIR31060.1
NUDIX domain-containing protein.
       0.576
SIR13118.1
Cobaltochelatase CobT subunit.
    
 0.554
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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