STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIR50570.1Phospholipid transport system substrate-binding protein. (211 aa)    
Predicted Functional Partners:
SIQ41490.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.985
SIQ18153.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 
 0.984
SIR50544.1
Phospholipid-binding lipoprotein MlaA.
 
 
 
 0.960
SIQ02961.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 
 0.953
SIQ02984.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 
 0.938
SIQ18184.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 
 0.874
SIR40272.1
Phospholipid transport system substrate-binding protein.
  
  
 
0.872
SIQ18218.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein/paraquat-inducible protein B.
 
 0.819
SIQ89309.1
Protein of unknown function.
  
     0.707
SIQ26586.1
Beta-barrel assembly machine subunit BamE.
  
    0.672
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.