STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ06906.1PFAM: AbgT putative transporter; C4-dicarboxylate anaerobic carrier; short chain fatty acid transporter; KEGG: ilo:IL1666 p-aminobenzoyl-glutamate transporter. (511 aa)    
Predicted Functional Partners:
ACZ06905.1
Amidohydrolase; KEGG: cjd:JJD26997_1065 carboxypeptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein.
  
  
 0.682
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
      0.556
ACZ10368.1
TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: eca:ECA2964 putative peptidase; Belongs to the peptidase M20A family.
 
  
 0.490
ACZ08892.1
Metal-dependent amidase/aminoacylase/carboxypeptidase-like protein; KEGG: hypothetical LOC584527.
 
  
 0.481
lysS
TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: gme:Gmet_2360 lysyl-tRNA synthetase, class-2; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.454
ACZ08894.1
KEGG: sit:TM1040_0517 hypothetical protein.
  
     0.400
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.