STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ06935.1Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1303 hypothetical protein. (254 aa)    
Predicted Functional Partners:
ACZ10072.1
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: dal:Dalk_4095 transcriptional regulator, AraC family.
 
 
 0.737
ACZ06934.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abu:Abu_1136 hypothetical protein.
  
    0.639
ACZ06936.1
Hypothetical protein.
       0.620
ACZ09150.1
PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: hch:HCH_00194 transcriptional regulator.
 
  
 0.501
ACZ08615.1
Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rhi:NGR_c08790 transcriptional regulator, AraC family.
  
     0.489
ACZ06937.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_3; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG: TPR Domain containing protein.
     
 0.438
ACZ09073.1
Conserved hypothetical protein; KEGG: cja:CJA_1194 DGPF domain family.
 
    0.412
ACZ10480.1
PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: hypothetical protein.
 
  
 0.411
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.409
ACZ06939.1
PFAM: phosphatidate cytidylyltransferase; KEGG: pca:Pcar_1916 putative phosphatidate cytidylyltransferase.
     
 0.402
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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