STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07035.1TIGRFAM: degV family protein; PFAM: Dak phosphatase; DegV family protein; KEGG: dvm:DvMF_0600 DegV family protein. (833 aa)    
Predicted Functional Partners:
ACZ07034.1
TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: abu:Abu_0978 HAD-superfamily phosphatase.
       0.798
ACZ08608.1
PFAM: protein of unknown function DUF322.
 
  
 0.754
ACZ07036.1
Putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: CBS domain containing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sat:SYN_00943 nitrogen regulatory IIA protein.
 
     0.679
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
    0.639
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
 
    0.627
ACZ10637.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
     0.526
ACZ09902.1
Pseudouridylate synthase-like protein; KEGG: abu:Abu_2199 tRNA pseudouridine synthase A.
 
    0.518
ACZ09551.1
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
  
    0.517
ACZ07644.1
Metal dependent phosphohydrolase; KEGG: similar to Dauer Up-Regulated family member (dur-1); TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
 
  
 0.514
ACZ07037.1
PFAM: Citrate transporter; Arsenical pump membrane protein; KEGG: dps:DP2070 hypothetical protein.
     
 0.509
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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