STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACZ07063.1KEGG: gsu:GSU2079 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain. (588 aa)    
Predicted Functional Partners:
ACZ09575.1
TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: sat:SYN_00550 rod shape-determining protein; Belongs to the SEDS family.
 
 0.975
ACZ07044.1
PFAM: cell cycle protein; KEGG: gbm:Gbem_0490 cell division protein FtsW; Belongs to the SEDS family.
 0.964
ACZ08866.1
TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: sat:SYN_00304 multimodular transpeptidase- transglycosylase.
 
 
0.946
ACZ10371.1
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: dvm:DvMF_1122 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.929
ACZ10500.1
PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rma:Rmag_0470 serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
 
 0.929
ACZ08040.1
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; KEGG: gbm:Gbem_0485 penicillin-binding protein transpeptidase.
  
  
 
0.926
ACZ08429.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.829
ACZ08033.1
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: geo:Geob_3485 cell shape determining protein, MreB/Mrl family.
 
 
 
 0.824
ACZ10486.1
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; cell division protein FtsA; KEGG: bba:Bd0211 rod shape-determining protein MreB.
 
 
 
 0.823
rsfS
Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
    0.811
Your Current Organism:
Sebaldella termitidis
NCBI taxonomy Id: 526218
Other names: S. termitidis ATCC 33386, Sebaldella termitidis ATCC 33386, Sebaldella termitidis NCTC 11300, Sebaldella termitidis str. ATCC 33386, Sebaldella termitidis strain ATCC 33386
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